Dca4379.1
Annotation
- 3-exons
- f-1
- sp|A5BP26_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_034590#GO:0003676;GO:0008270#2F0P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1163)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4379.1 |
118 |
573 |
594 |
37.87 |
456 |
47 |
7e-127
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BP26_VITVI |
490 |
967 |
970 |
49.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4379.1 |
158 |
587 |
594 |
28.61 |
430 |
34 |
1e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
917 |
1419 |
1428 |
35.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1163 |
Augustus |
mRNA |
23009 |
25119 |
. |
- |
. |
ID=Dca4379.1;Parent=Dca4379 |
| scaffold1163 |
Augustus |
exon |
23009 |
23731 |
. |
- |
. |
ID=Dca4379.1.exon1;Parent=Dca4379.1 |
| scaffold1163 |
Augustus |
exon |
23947 |
24524 |
. |
- |
. |
ID=Dca4379.1.exon2;Parent=Dca4379.1 |
| scaffold1163 |
Augustus |
exon |
24636 |
25119 |
. |
- |
. |
ID=Dca4379.1.exon3;Parent=Dca4379.1 |
