Carnation DB

Dca43852.1

Annotation

5-exons
f-1
sp|D7TVF7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g01440#GO:0004842;GO:0008270#2F0P0C
Os06t0529800-01 Zinc finger, PHD-type domain containing protein.
Repeat List (scaffold50)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43852.1	10	423	425	56.47	414	58	6e-139
Target_name	Start	End	Length	Cov(%)
sp\|D7TVF7_VITVI	3	415	416	99.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43852.1	14	425	425	50.11	412	52	6e-118
Target_name	Start	End	Length	Cov(%)
Os06t0529800-01	17	419	421	95.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold50	Augus-PASA	mRNA	242847	246395	.	-	.	ID=Dca43852.1;Parent=Dca43852
scaffold50	Augus-PASA	exon	242847	242936	.	-	.	ID=Dca43852.1.exon1;Parent=Dca43852.1
scaffold50	Augus-PASA	exon	243018	243683	.	-	.	ID=Dca43852.1.exon2;Parent=Dca43852.1
scaffold50	Augus-PASA	exon	244104	244364	.	-	.	ID=Dca43852.1.exon3;Parent=Dca43852.1
scaffold50	Augus-PASA	exon	245107	245265	.	-	.	ID=Dca43852.1.exon4;Parent=Dca43852.1
scaffold50	Augus-PASA	exon	246294	246395	.	-	.	ID=Dca43852.1.exon5;Parent=Dca43852.1