Carnation DB

Dca4392.1

Annotation

13-exons
f-1
sp|D7SHM6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g08880#unknown#0F0P0C
sp|B9RAY2_RICCO#Transcription factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1509750#unknown#0F0P0C
Repeat List (scaffold1164)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4392.1	1	386	563	42.09	386	60	5e-130
Target_name	Start	End	Length	Cov(%)
sp\|D7SHM6_VITVI	87	478	498	78.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4392.1	1	377	563	36.76	377	55	3e-118
Target_name	Start	End	Length	Cov(%)
AT5G63080.1	87	450	462	78.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1164	Augustus	mRNA	36226	44454	.	+	.	ID=Dca4392.1;Parent=Dca4392
scaffold1164	Augustus	exon	36226	36354	.	+	.	ID=Dca4392.1.exon1;Parent=Dca4392.1
scaffold1164	Augustus	exon	36448	36607	.	+	.	ID=Dca4392.1.exon2;Parent=Dca4392.1
scaffold1164	Augustus	exon	36725	36842	.	+	.	ID=Dca4392.1.exon3;Parent=Dca4392.1
scaffold1164	Augustus	exon	37130	37199	.	+	.	ID=Dca4392.1.exon4;Parent=Dca4392.1
scaffold1164	Augustus	exon	37294	37374	.	+	.	ID=Dca4392.1.exon5;Parent=Dca4392.1
scaffold1164	Augustus	exon	37506	37562	.	+	.	ID=Dca4392.1.exon6;Parent=Dca4392.1
scaffold1164	Augustus	exon	37654	37765	.	+	.	ID=Dca4392.1.exon7;Parent=Dca4392.1
scaffold1164	Augustus	exon	38003	38429	.	+	.	ID=Dca4392.1.exon8;Parent=Dca4392.1
scaffold1164	Augustus	exon	41933	41963	.	+	.	ID=Dca4392.1.exon9;Parent=Dca4392.1
scaffold1164	Augustus	exon	42951	43103	.	+	.	ID=Dca4392.1.exon10;Parent=Dca4392.1
scaffold1164	Augustus	exon	43885	44037	.	+	.	ID=Dca4392.1.exon11;Parent=Dca4392.1
scaffold1164	Augustus	exon	44143	44265	.	+	.	ID=Dca4392.1.exon12;Parent=Dca4392.1
scaffold1164	Augustus	exon	44377	44454	.	+	.	ID=Dca4392.1.exon13;Parent=Dca4392.1