Dca44004.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5023)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44004.1 |
34 |
267 |
545 |
13.94 |
234 |
31 |
1e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
23 |
262 |
896 |
26.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44004.1 |
218 |
530 |
545 |
18.89 |
313 |
33 |
8e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1078 |
1384 |
1401 |
21.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5023 |
Augustus |
mRNA |
23359 |
28134 |
. |
+ |
. |
ID=Dca44004.1;Parent=Dca44004 |
| scaffold5023 |
Augustus |
exon |
23359 |
24136 |
. |
+ |
. |
ID=Dca44004.1.exon1;Parent=Dca44004.1 |
| scaffold5023 |
Augustus |
exon |
27275 |
28134 |
. |
+ |
. |
ID=Dca44004.1.exon2;Parent=Dca44004.1 |
