Carnation DB

Dca44009.1

Annotation

9-exons
f-1
sp|F6H2U3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g02200#GO:0005783;GO:0003854;GO:0000166;GO:0006694#2F1P1C
AT2G26260.1 | Symbols: AT3BETAHSD/D2, 3BETAHSD/D2 | 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 | chr2:11178237-11182872 FORWARD LENGTH=564
Repeat List (scaffold5024)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44009.1	1	398	400	72	398	72	1e-175
Target_name	Start	End	Length	Cov(%)
sp\|F6H2U3_VITVI	130	529	758	52.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44009.1	1	398	400	66.5	398	67	1e-162
Target_name	Start	End	Length	Cov(%)
AT2G26260.1	157	556	564	70.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5024	Augustus	mRNA	12821	22195	.	-	.	ID=Dca44009.1;Parent=Dca44009
scaffold5024	Augustus	exon	12821	12942	.	-	.	ID=Dca44009.1.exon1;Parent=Dca44009.1
scaffold5024	Augustus	exon	14503	14569	.	-	.	ID=Dca44009.1.exon2;Parent=Dca44009.1
scaffold5024	Augustus	exon	15021	15177	.	-	.	ID=Dca44009.1.exon3;Parent=Dca44009.1
scaffold5024	Augustus	exon	16425	16599	.	-	.	ID=Dca44009.1.exon4;Parent=Dca44009.1
scaffold5024	Augustus	exon	18358	18463	.	-	.	ID=Dca44009.1.exon5;Parent=Dca44009.1
scaffold5024	Augustus	exon	19551	19749	.	-	.	ID=Dca44009.1.exon6;Parent=Dca44009.1
scaffold5024	Augustus	exon	20013	20092	.	-	.	ID=Dca44009.1.exon7;Parent=Dca44009.1
scaffold5024	Augustus	exon	20817	20942	.	-	.	ID=Dca44009.1.exon8;Parent=Dca44009.1
scaffold5024	Augustus	exon	22025	22195	.	-	.	ID=Dca44009.1.exon9;Parent=Dca44009.1