Dca44098.1
Annotation
- 3-exons
- f-1
- sp|B9GIZ9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=MYB188#GO:0005634;GO:0003677;GO:0006355#1F1P1C
- AT5G14340.1 | Symbols: AtMYB40, MYB40 | myb domain protein 40 | chr5:4623367-4624779 FORWARD LENGTH=263
- Repeat List (scaffold5042)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44098.1 |
1 |
244 |
245 |
55.91 |
244 |
50 |
2e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GIZ9_POPTR |
1 |
269 |
282 |
95.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44098.1 |
1 |
110 |
245 |
35.91 |
110 |
69 |
1e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G14340.1 |
1 |
129 |
263 |
49.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5042 |
Augustus |
mRNA |
5438 |
7173 |
. |
- |
. |
ID=Dca44098.1;Parent=Dca44098 |
| scaffold5042 |
Augustus |
exon |
5438 |
5969 |
. |
- |
. |
ID=Dca44098.1.exon1;Parent=Dca44098.1 |
| scaffold5042 |
Augustus |
exon |
6162 |
6234 |
. |
- |
. |
ID=Dca44098.1.exon2;Parent=Dca44098.1 |
| scaffold5042 |
Augustus |
exon |
7041 |
7173 |
. |
- |
. |
ID=Dca44098.1.exon3;Parent=Dca44098.1 |
