Carnation DB

Dca44109.1

Annotation

7-exons
f-1
sp|B9S0N2_RICCO#Syntaxin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1356980#GO:0016020;GO:0005484;GO:0006886#1F1P1C
Repeat List (scaffold5046)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44109.1	5	181	181	76.79	177	79	6e-78
Target_name	Start	End	Length	Cov(%)
sp\|B9S0N2_RICCO	92	266	266	65.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44109.1	5	180	181	75.13	176	77	1e-76
Target_name	Start	End	Length	Cov(%)
AT3G09740.1	92	266	266	65.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5046	Augustus	mRNA	27296	29476	.	-	.	ID=Dca44109.1;Parent=Dca44109
scaffold5046	Augustus	exon	27296	27311	.	-	.	ID=Dca44109.1.exon1;Parent=Dca44109.1
scaffold5046	Augustus	exon	27715	27791	.	-	.	ID=Dca44109.1.exon2;Parent=Dca44109.1
scaffold5046	Augustus	exon	27894	27956	.	-	.	ID=Dca44109.1.exon3;Parent=Dca44109.1
scaffold5046	Augustus	exon	28042	28086	.	-	.	ID=Dca44109.1.exon4;Parent=Dca44109.1
scaffold5046	Augustus	exon	28871	28939	.	-	.	ID=Dca44109.1.exon5;Parent=Dca44109.1
scaffold5046	Augustus	exon	29089	29174	.	-	.	ID=Dca44109.1.exon6;Parent=Dca44109.1
scaffold5046	Augustus	exon	29287	29476	.	-	.	ID=Dca44109.1.exon7;Parent=Dca44109.1