Carnation DB

Dca4420.1

Annotation

5-exons
f-1
sp|B9N9H9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_746487#unknown#0F0P0C
AT1G73320.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:27565728-27567206 REVERSE LENGTH=316
Repeat List (scaffold1166)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4420.1	10	269	272	66.91	260	69	5e-101
Target_name	Start	End	Length	Cov(%)
sp\|B9N9H9_POPTR	2	260	260	99.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4420.1	1	269	272	61.76	269	60	3e-96
Target_name	Start	End	Length	Cov(%)
AT1G73320.1	20	301	316	89.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1166	Augus-PASA	mRNA	43254	45193	.	+	.	ID=Dca4420.1;Parent=Dca4420
scaffold1166	Augus-PASA	exon	43254	43493	.	+	.	ID=Dca4420.1.exon1;Parent=Dca4420.1
scaffold1166	Augus-PASA	exon	44036	44178	.	+	.	ID=Dca4420.1.exon2;Parent=Dca4420.1
scaffold1166	Augus-PASA	exon	44464	44648	.	+	.	ID=Dca4420.1.exon3;Parent=Dca4420.1
scaffold1166	Augus-PASA	exon	44862	44975	.	+	.	ID=Dca4420.1.exon4;Parent=Dca4420.1
scaffold1166	Augus-PASA	exon	45057	45193	.	+	.	ID=Dca4420.1.exon5;Parent=Dca4420.1