Carnation DB

Dca4421.1

Annotation

6-exons
f-1
sp|F6HKD0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g04710#GO:0005634;GO:0003676;GO:0008270#2F0P1C
Os03t0263500-01 Similar to Splicing factor 3A subunit 2 (Spliceosome associated protein 62) (SAP 62) (SF3a66).
Repeat List (scaffold1166)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4421.1	1	226	329	61.7	226	90	2e-113
Target_name	Start	End	Length	Cov(%)
sp\|F6HKD0_VITVI	1	226	357	63.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4421.1	1	224	329	57.44	224	85	2e-106
Target_name	Start	End	Length	Cov(%)
Os03t0263500-01	1	224	322	69.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1166	Augustus	mRNA	46142	48966	.	+	.	ID=Dca4421.1;Parent=Dca4421
scaffold1166	Augustus	exon	46142	46463	.	+	.	ID=Dca4421.1.exon1;Parent=Dca4421.1
scaffold1166	Augustus	exon	47417	47493	.	+	.	ID=Dca4421.1.exon2;Parent=Dca4421.1
scaffold1166	Augustus	exon	47596	47661	.	+	.	ID=Dca4421.1.exon3;Parent=Dca4421.1
scaffold1166	Augustus	exon	47767	47841	.	+	.	ID=Dca4421.1.exon4;Parent=Dca4421.1
scaffold1166	Augustus	exon	47921	47995	.	+	.	ID=Dca4421.1.exon5;Parent=Dca4421.1
scaffold1166	Augustus	exon	48592	48966	.	+	.	ID=Dca4421.1.exon6;Parent=Dca4421.1