Carnation DB

Dca4432.1

Annotation

5-exons
f-1
sp|F6HPY7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0104g01780#unknown#0F0P0C
AT3G62770.1 | Symbols: AtATG18a | Transducin/WD40 repeat-like superfamily protein | chr3:23218858-23221110 REVERSE LENGTH=425
Repeat List (scaffold1166)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4432.1	1	427	429	68.29	427	66	1e-165
Target_name	Start	End	Length	Cov(%)
sp\|F6HPY7_VITVI	1	437	439	99.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4432.1	39	425	429	64.33	387	70	2e-155
Target_name	Start	End	Length	Cov(%)
AT3G62770.1	33	421	425	91.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1166	Augus-PASA	mRNA	117136	119788	.	+	.	ID=Dca4432.1;Parent=Dca4432
scaffold1166	Augus-PASA	exon	117136	117582	.	+	.	ID=Dca4432.1.exon1;Parent=Dca4432.1
scaffold1166	Augus-PASA	exon	118023	118439	.	+	.	ID=Dca4432.1.exon2;Parent=Dca4432.1
scaffold1166	Augus-PASA	exon	118671	118878	.	+	.	ID=Dca4432.1.exon3;Parent=Dca4432.1
scaffold1166	Augus-PASA	exon	119203	119329	.	+	.	ID=Dca4432.1.exon4;Parent=Dca4432.1
scaffold1166	Augus-PASA	exon	119698	119788	.	+	.	ID=Dca4432.1.exon5;Parent=Dca4432.1