Dca44403.1
Annotation
- 4-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- AT3G24255.1 | Symbols: | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | chr3:8789471-8793208 FORWARD LENGTH=746
- Repeat List (scaffold5107)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44403.1 |
84 |
327 |
385 |
22.85 |
244 |
37 |
2e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
701 |
936 |
1110 |
21.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44403.1 |
115 |
276 |
385 |
17.4 |
162 |
40 |
3e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G24255.1 |
3 |
173 |
746 |
22.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5107 |
Augustus |
mRNA |
13753 |
15906 |
. |
+ |
. |
ID=Dca44403.1;Parent=Dca44403 |
| scaffold5107 |
Augustus |
exon |
13753 |
13992 |
. |
+ |
. |
ID=Dca44403.1.exon1;Parent=Dca44403.1 |
| scaffold5107 |
Augustus |
exon |
14655 |
15425 |
. |
+ |
. |
ID=Dca44403.1.exon2;Parent=Dca44403.1 |
| scaffold5107 |
Augustus |
exon |
15662 |
15730 |
. |
+ |
. |
ID=Dca44403.1.exon3;Parent=Dca44403.1 |
| scaffold5107 |
Augustus |
exon |
15829 |
15906 |
. |
+ |
. |
ID=Dca44403.1.exon4;Parent=Dca44403.1 |
