Dca4445.1
Annotation
- 4-exons
- f-1
- sp|D7THT2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g08930#unknown#0F0P0C
- Os09t0504800-01 tRNA-splicing endonuclease, subunit Sen54, N-terminal domain containing protein.
- Repeat List (scaffold1167)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4445.1 |
14 |
261 |
261 |
49.04 |
248 |
51 |
5e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7THT2_VITVI |
29 |
281 |
281 |
90.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4445.1 |
28 |
260 |
261 |
39.08 |
233 |
44 |
5e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G57360.1 |
21 |
253 |
254 |
91.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1167 |
Augus-PASA |
mRNA |
30533 |
32705 |
. |
- |
. |
ID=Dca4445.1;Parent=Dca4445 |
| scaffold1167 |
Augus-PASA |
exon |
30533 |
30671 |
. |
- |
. |
ID=Dca4445.1.exon1;Parent=Dca4445.1 |
| scaffold1167 |
Augus-PASA |
exon |
31239 |
31619 |
. |
- |
. |
ID=Dca4445.1.exon2;Parent=Dca4445.1 |
| scaffold1167 |
Augus-PASA |
exon |
32359 |
32490 |
. |
- |
. |
ID=Dca4445.1.exon3;Parent=Dca4445.1 |
| scaffold1167 |
Augustus |
exon |
32572 |
32705 |
. |
- |
. |
ID=Dca4445.1.exon4;Parent=Dca4445.1 |
