Carnation DB

Dca44457.1

Annotation

7-exons
f-1
sp|B9RXF3_RICCO#50S ribosomal protein L4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0903300#GO:0005840;GO:0003735;GO:0006412#1F1P1C
Repeat List (scaffold5118)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44457.1	1	287	287	74.91	287	73	1e-117
Target_name	Start	End	Length	Cov(%)
sp\|B9RXF3_RICCO	1	294	294	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44457.1	4	287	287	71.77	284	70	1e-114
Target_name	Start	End	Length	Cov(%)
AT2G20060.1	7	300	300	98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5118	Augus-PASA	mRNA	175	5201	.	+	.	ID=Dca44457.1;Parent=Dca44457
scaffold5118	Augus-PASA	exon	175	264	.	+	.	ID=Dca44457.1.exon1;Parent=Dca44457.1
scaffold5118	Augus-PASA	exon	693	813	.	+	.	ID=Dca44457.1.exon2;Parent=Dca44457.1
scaffold5118	Augus-PASA	exon	1922	2070	.	+	.	ID=Dca44457.1.exon3;Parent=Dca44457.1
scaffold5118	Augus-PASA	exon	2161	2268	.	+	.	ID=Dca44457.1.exon4;Parent=Dca44457.1
scaffold5118	Augus-PASA	exon	2373	2492	.	+	.	ID=Dca44457.1.exon5;Parent=Dca44457.1
scaffold5118	Augus-PASA	exon	4493	4666	.	+	.	ID=Dca44457.1.exon6;Parent=Dca44457.1
scaffold5118	Augus-PASA	exon	5100	5201	.	+	.	ID=Dca44457.1.exon7;Parent=Dca44457.1