Carnation DB

Dca44530.1

Annotation

6-exons
f-1
sp|F6HU88_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g02820#unknown#0F0P0C
AT1G64720.1 | Symbols: CP5 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr1:24046887-24048537 REVERSE LENGTH=385
Repeat List (scaffold513)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44530.1	1	428	428	61.68	428	59	9e-143
Target_name	Start	End	Length	Cov(%)
sp\|F6HU88_VITVI	1	438	438	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44530.1	24	428	428	55.14	405	59	1e-133
Target_name	Start	End	Length	Cov(%)
AT1G64720.1	19	385	385	95.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold513	Augus-PASA	mRNA	10522	13642	.	+	.	ID=Dca44530.1;Parent=Dca44530
scaffold513	Augus-PASA	exon	10522	10844	.	+	.	ID=Dca44530.1.exon1;Parent=Dca44530.1
scaffold513	Augus-PASA	exon	11464	11629	.	+	.	ID=Dca44530.1.exon2;Parent=Dca44530.1
scaffold513	Augus-PASA	exon	12236	12412	.	+	.	ID=Dca44530.1.exon3;Parent=Dca44530.1
scaffold513	Augus-PASA	exon	12547	12630	.	+	.	ID=Dca44530.1.exon4;Parent=Dca44530.1
scaffold513	Augus-PASA	exon	12994	13072	.	+	.	ID=Dca44530.1.exon5;Parent=Dca44530.1
scaffold513	Augus-PASA	exon	13185	13642	.	+	.	ID=Dca44530.1.exon6;Parent=Dca44530.1