Carnation DB

Dca44737.1

Annotation

7-exons
f-1
sp|A5AEZ0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_028354#GO:0008270#1F0P0C
AT1G78420.1 | Symbols: | RING/U-box superfamily protein | chr1:29505278-29507272 FORWARD LENGTH=401
Repeat List (scaffold5173)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44737.1	431	504	504	8.33	74	57	3e-10
Target_name	Start	End	Length	Cov(%)
sp\|A5AEZ0_VITVI	355	422	422	16.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44737.1	1	305	504	37.69	305	61	2e-99
Target_name	Start	End	Length	Cov(%)
AT1G78420.1	1	309	401	77.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5173	Augus-PASA	mRNA	19154	23303	.	+	.	ID=Dca44737.1;Parent=Dca44737
scaffold5173	Augus-PASA	exon	19154	19348	.	+	.	ID=Dca44737.1.exon1;Parent=Dca44737.1
scaffold5173	Augus-PASA	exon	20237	20288	.	+	.	ID=Dca44737.1.exon2;Parent=Dca44737.1
scaffold5173	Augus-PASA	exon	20401	20446	.	+	.	ID=Dca44737.1.exon3;Parent=Dca44737.1
scaffold5173	Augus-PASA	exon	20573	20654	.	+	.	ID=Dca44737.1.exon4;Parent=Dca44737.1
scaffold5173	Augus-PASA	exon	20753	20982	.	+	.	ID=Dca44737.1.exon5;Parent=Dca44737.1
scaffold5173	Augus-PASA	exon	22079	22145	.	+	.	ID=Dca44737.1.exon6;Parent=Dca44737.1
scaffold5173	Augus-PASA	exon	22461	23303	.	+	.	ID=Dca44737.1.exon7;Parent=Dca44737.1