Dca4478.1
Annotation
- 4-exons
- f-1
- sp|E4MX93_THEHA#mRNA, clone: RTFL01-17-G05#Thellungiella halophila (Salt cress)#unknown#GO:0009228#0F1P0C
- Repeat List (scaffold11687)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4478.1 |
1 |
643 |
645 |
84.65 |
643 |
85 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E4MX93_THEHA |
1 |
641 |
644 |
99.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4478.1 |
2 |
643 |
645 |
84.96 |
642 |
85 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G29630.2 |
3 |
641 |
644 |
99.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11687 |
Augustus |
mRNA |
1622 |
4226 |
. |
- |
. |
ID=Dca4478.1;Parent=Dca4478 |
| scaffold11687 |
Augustus |
exon |
1622 |
2298 |
. |
- |
. |
ID=Dca4478.1.exon1;Parent=Dca4478.1 |
| scaffold11687 |
Augustus |
exon |
2649 |
3475 |
. |
- |
. |
ID=Dca4478.1.exon2;Parent=Dca4478.1 |
| scaffold11687 |
Augustus |
exon |
3571 |
3698 |
. |
- |
. |
ID=Dca4478.1.exon3;Parent=Dca4478.1 |
| scaffold11687 |
Augustus |
exon |
3922 |
4226 |
. |
- |
. |
ID=Dca4478.1.exon4;Parent=Dca4478.1 |
