Carnation DB

Dca44909.1

Annotation

6-exons
f-1
sp|B9HSD6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_884937#GO:0003676;GO:0008270#2F0P0C
AT2G47850.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr2:19595953-19598119 FORWARD LENGTH=468
Repeat List (scaffold5210)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44909.1	1	428	444	61.48	428	63	1e-143
Target_name	Start	End	Length	Cov(%)
sp\|B9HSD6_POPTR	32	454	456	92.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44909.1	1	413	444	51.57	413	55	2e-118
Target_name	Start	End	Length	Cov(%)
AT2G47850.1	32	437	468	86.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5210	Augustus	mRNA	5508	11376	.	-	.	ID=Dca44909.1;Parent=Dca44909
scaffold5210	Augustus	exon	5508	5885	.	-	.	ID=Dca44909.1.exon1;Parent=Dca44909.1
scaffold5210	Augustus	exon	9274	9588	.	-	.	ID=Dca44909.1.exon2;Parent=Dca44909.1
scaffold5210	Augustus	exon	10202	10507	.	-	.	ID=Dca44909.1.exon3;Parent=Dca44909.1
scaffold5210	Augustus	exon	10624	10743	.	-	.	ID=Dca44909.1.exon4;Parent=Dca44909.1
scaffold5210	Augustus	exon	10948	11016	.	-	.	ID=Dca44909.1.exon5;Parent=Dca44909.1
scaffold5210	Augustus	exon	11230	11376	.	-	.	ID=Dca44909.1.exon6;Parent=Dca44909.1