Carnation DB

Dca45002.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold5230)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45002.1	92	1177	1182	66.41	1086	62	0
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	497	1712	1717	70.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45002.1	406	760	1182	10.99	355	34	9e-57
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	237	602	707	51.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5230	Augustus	mRNA	2360	6450	.	+	.	ID=Dca45002.1;Parent=Dca45002
scaffold5230	Augustus	exon	2360	2849	.	+	.	ID=Dca45002.1.exon1;Parent=Dca45002.1
scaffold5230	Augustus	exon	3008	4634	.	+	.	ID=Dca45002.1.exon2;Parent=Dca45002.1
scaffold5230	Augustus	exon	4737	4911	.	+	.	ID=Dca45002.1.exon3;Parent=Dca45002.1
scaffold5230	Augustus	exon	5035	5673	.	+	.	ID=Dca45002.1.exon4;Parent=Dca45002.1
scaffold5230	Augustus	exon	5833	6450	.	+	.	ID=Dca45002.1.exon5;Parent=Dca45002.1