Dca45047.1
Annotation
- 2-exons
- f-1
- sp|Q2HX35_IPOBA#LINE-type retrotransposon LIb DNA, complete sequence, Insertion at the S11 site#Ipomoea batatas (Sweet potato) (Convolvulus batatas)#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0008270;GO:0006278#4F1P0C
- Repeat List (scaffold5242)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45047.1 |
11 |
68 |
107 |
25.23 |
58 |
41 |
2e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2HX35_IPOBA |
1358 |
1424 |
1898 |
3.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5242 |
Augustus |
mRNA |
8879 |
9633 |
. |
+ |
. |
ID=Dca45047.1;Parent=Dca45047 |
| scaffold5242 |
Augustus |
exon |
8879 |
9097 |
. |
+ |
. |
ID=Dca45047.1.exon1;Parent=Dca45047.1 |
| scaffold5242 |
Augustus |
exon |
9529 |
9633 |
. |
+ |
. |
ID=Dca45047.1.exon2;Parent=Dca45047.1 |
