Dca45060.1
Annotation
- 2-exons
- f-1
- sp|O23741_BRAOL#SLG-Sc and SLA-Sc genes and Melmoth retrotransposon sequence#Brassica oleracea (Wild cabbage)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5246)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45060.1 |
37 |
152 |
157 |
33.75 |
116 |
45 |
4e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O23741_BRAOL |
382 |
500 |
1131 |
10.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45060.1 |
42 |
154 |
157 |
22.29 |
113 |
30 |
3e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0678200-01 |
21 |
134 |
141 |
80.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5246 |
Augustus |
mRNA |
28348 |
28925 |
. |
- |
. |
ID=Dca45060.1;Parent=Dca45060 |
| scaffold5246 |
Augustus |
exon |
28348 |
28363 |
. |
- |
. |
ID=Dca45060.1.exon1;Parent=Dca45060.1 |
| scaffold5246 |
Augustus |
exon |
28468 |
28925 |
. |
- |
. |
ID=Dca45060.1.exon2;Parent=Dca45060.1 |
