Carnation DB

Dca45068.1

Annotation

5-exons
f-1
sp|B9GEQ0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_815182#GO:0008270#1F0P0C
Repeat List (scaffold5249)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45068.1	61	336	354	31.35	276	33	7e-27
Target_name	Start	End	Length	Cov(%)
sp\|B9GEQ0_POPTR	85	379	386	76.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45068.1	164	353	354	20.05	190	37	2e-18
Target_name	Start	End	Length	Cov(%)
AT5G22000.2	229	375	375	39.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5249	Augustus	mRNA	18403	22008	.	-	.	ID=Dca45068.1;Parent=Dca45068
scaffold5249	Augustus	exon	18403	18952	.	-	.	ID=Dca45068.1.exon1;Parent=Dca45068.1
scaffold5249	Augustus	exon	19125	19346	.	-	.	ID=Dca45068.1.exon2;Parent=Dca45068.1
scaffold5249	Augustus	exon	19617	19724	.	-	.	ID=Dca45068.1.exon3;Parent=Dca45068.1
scaffold5249	Augustus	exon	21740	21880	.	-	.	ID=Dca45068.1.exon4;Parent=Dca45068.1
scaffold5249	Augustus	exon	21965	22008	.	-	.	ID=Dca45068.1.exon5;Parent=Dca45068.1