Dca45135.1
Annotation
- 4-exons
- f-1
- sp|F6I5V9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0074g00510#GO:0005524;GO:0008026;GO:0003676#3F0P0C
- sp|B9SY26_RICCO#Dead box ATP-dependent RNA helicase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0436820#GO:0005524;GO:0008026;GO:0003676#3F0P0C
- Repeat List (scaffold5262)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45135.1 |
1 |
277 |
286 |
50.69 |
277 |
45 |
5e-66
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6I5V9_VITVI |
54 |
382 |
407 |
80.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45135.1 |
1 |
281 |
286 |
45.45 |
281 |
43 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G28600.1 |
54 |
328 |
502 |
54.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5262 |
Augustus |
mRNA |
1627 |
4638 |
. |
- |
. |
ID=Dca45135.1;Parent=Dca45135 |
| scaffold5262 |
Augustus |
exon |
1627 |
1788 |
. |
- |
. |
ID=Dca45135.1.exon1;Parent=Dca45135.1 |
| scaffold5262 |
Augustus |
exon |
3110 |
3209 |
. |
- |
. |
ID=Dca45135.1.exon2;Parent=Dca45135.1 |
| scaffold5262 |
Augustus |
exon |
3624 |
3712 |
. |
- |
. |
ID=Dca45135.1.exon3;Parent=Dca45135.1 |
| scaffold5262 |
Augustus |
exon |
4129 |
4638 |
. |
- |
. |
ID=Dca45135.1.exon4;Parent=Dca45135.1 |
