Carnation DB

Dca45136.1

Annotation

21-exons
f-1
sp|F6H3V5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g06160#GO:0005488#1F0P0C
AT4G32050.1 | Symbols: | neurochondrin family protein | chr4:15496620-15500717 FORWARD LENGTH=618
Repeat List (scaffold5262)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45136.1	28	245	873	12.25	218	45	7e-46
Target_name	Start	End	Length	Cov(%)
sp\|F6H3V5_VITVI	7	224	627	34.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45136.1	18	245	873	11.34	228	40	4e-44
Target_name	Start	End	Length	Cov(%)
AT4G32050.1	5	228	618	36.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5262	Augustus	mRNA	7991	18734	.	-	.	ID=Dca45136.1;Parent=Dca45136
scaffold5262	Augustus	exon	7991	8046	.	-	.	ID=Dca45136.1.exon1;Parent=Dca45136.1
scaffold5262	Augustus	exon	8162	8216	.	-	.	ID=Dca45136.1.exon2;Parent=Dca45136.1
scaffold5262	Augustus	exon	8343	8506	.	-	.	ID=Dca45136.1.exon3;Parent=Dca45136.1
scaffold5262	Augustus	exon	9381	9453	.	-	.	ID=Dca45136.1.exon4;Parent=Dca45136.1
scaffold5262	Augustus	exon	9581	9685	.	-	.	ID=Dca45136.1.exon5;Parent=Dca45136.1
scaffold5262	Augustus	exon	10904	11003	.	-	.	ID=Dca45136.1.exon6;Parent=Dca45136.1
scaffold5262	Augustus	exon	11101	11190	.	-	.	ID=Dca45136.1.exon7;Parent=Dca45136.1
scaffold5262	Augustus	exon	11325	11380	.	-	.	ID=Dca45136.1.exon8;Parent=Dca45136.1
scaffold5262	Augustus	exon	11718	11840	.	-	.	ID=Dca45136.1.exon9;Parent=Dca45136.1
scaffold5262	Augustus	exon	13168	13321	.	-	.	ID=Dca45136.1.exon10;Parent=Dca45136.1
scaffold5262	Augustus	exon	13410	13530	.	-	.	ID=Dca45136.1.exon11;Parent=Dca45136.1
scaffold5262	Augustus	exon	14632	14725	.	-	.	ID=Dca45136.1.exon12;Parent=Dca45136.1
scaffold5262	Augustus	exon	15606	15701	.	-	.	ID=Dca45136.1.exon13;Parent=Dca45136.1
scaffold5262	Augustus	exon	15783	15886	.	-	.	ID=Dca45136.1.exon14;Parent=Dca45136.1
scaffold5262	Augustus	exon	15997	16133	.	-	.	ID=Dca45136.1.exon15;Parent=Dca45136.1
scaffold5262	Augustus	exon	16234	16375	.	-	.	ID=Dca45136.1.exon16;Parent=Dca45136.1
scaffold5262	Augustus	exon	16475	16691	.	-	.	ID=Dca45136.1.exon17;Parent=Dca45136.1
scaffold5262	Augustus	exon	17644	17739	.	-	.	ID=Dca45136.1.exon18;Parent=Dca45136.1
scaffold5262	Augustus	exon	17821	17924	.	-	.	ID=Dca45136.1.exon19;Parent=Dca45136.1
scaffold5262	Augustus	exon	18035	18105	.	-	.	ID=Dca45136.1.exon20;Parent=Dca45136.1
scaffold5262	Augustus	exon	18271	18734	.	-	.	ID=Dca45136.1.exon21;Parent=Dca45136.1