Dca45179.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5270)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45179.1 |
1 |
651 |
651 |
68.66 |
651 |
61 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
615 |
1353 |
1553 |
47.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45179.1 |
1 |
624 |
651 |
40.09 |
624 |
38 |
2e-127
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
613 |
1287 |
1539 |
43.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5270 |
Augustus |
mRNA |
9387 |
11599 |
. |
- |
. |
ID=Dca45179.1;Parent=Dca45179 |
| scaffold5270 |
Augustus |
exon |
9387 |
10040 |
. |
- |
. |
ID=Dca45179.1.exon1;Parent=Dca45179.1 |
| scaffold5270 |
Augustus |
exon |
10158 |
10318 |
. |
- |
. |
ID=Dca45179.1.exon2;Parent=Dca45179.1 |
| scaffold5270 |
Augustus |
exon |
10384 |
11045 |
. |
- |
. |
ID=Dca45179.1.exon3;Parent=Dca45179.1 |
| scaffold5270 |
Augustus |
exon |
11121 |
11599 |
. |
- |
. |
ID=Dca45179.1.exon4;Parent=Dca45179.1 |
