Carnation DB

Dca45180.1

Annotation

6-exons
f-322
sp|Q53J71_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy sub-class#Oryza sativa subsp japonica (Rice)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold5270)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45180.1	145	358	403	17.86	214	34	9e-20
Target_name	Start	End	Length	Cov(%)
sp\|Q53J71_ORYSJ	288	493	1530	13.46

AtOs (Arabidopsis thaliana & Oryza sativa)

No data

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5270	Augustus	mRNA	12035	15358	.	-	.	ID=Dca45180.1;Parent=Dca45180
scaffold5270	Augustus	exon	12035	12490	.	-	.	ID=Dca45180.1.exon1;Parent=Dca45180.1
scaffold5270	Augustus	exon	12567	12674	.	-	.	ID=Dca45180.1.exon2;Parent=Dca45180.1
scaffold5270	Augustus	exon	12921	13247	.	-	.	ID=Dca45180.1.exon3;Parent=Dca45180.1
scaffold5270	Augustus	exon	13573	13624	.	-	.	ID=Dca45180.1.exon4;Parent=Dca45180.1
scaffold5270	Augustus	exon	14756	14832	.	-	.	ID=Dca45180.1.exon5;Parent=Dca45180.1
scaffold5270	Augustus	exon	15167	15358	.	-	.	ID=Dca45180.1.exon6;Parent=Dca45180.1