Dca45212.1
Annotation
- 2-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|O22148_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g45230#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold528)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45212.1 |
1 |
147 |
164 |
47.56 |
147 |
48 |
2e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
542 |
704 |
1365 |
11.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45212.1 |
1 |
140 |
164 |
32.92 |
140 |
35 |
4e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
449 |
603 |
857 |
18.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold528 |
Augustus |
mRNA |
19240 |
20703 |
. |
- |
. |
ID=Dca45212.1;Parent=Dca45212 |
| scaffold528 |
Augustus |
exon |
19240 |
19295 |
. |
- |
. |
ID=Dca45212.1.exon1;Parent=Dca45212.1 |
| scaffold528 |
Augustus |
exon |
20265 |
20703 |
. |
- |
. |
ID=Dca45212.1.exon2;Parent=Dca45212.1 |
