Dca45225.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold528)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45225.1 |
5 |
321 |
321 |
46.72 |
317 |
44 |
3e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
485 |
822 |
1313 |
25.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45225.1 |
26 |
213 |
321 |
21.18 |
188 |
35 |
2e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
469 |
662 |
1428 |
13.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold528 |
Augustus |
mRNA |
132060 |
133258 |
. |
+ |
. |
ID=Dca45225.1;Parent=Dca45225 |
| scaffold528 |
Augustus |
exon |
132060 |
132627 |
. |
+ |
. |
ID=Dca45225.1.exon1;Parent=Dca45225.1 |
| scaffold528 |
Augustus |
exon |
132861 |
133258 |
. |
+ |
. |
ID=Dca45225.1.exon2;Parent=Dca45225.1 |
