Dca45242.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5287)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45242.1 |
1 |
377 |
377 |
67.1 |
377 |
64 |
2e-150
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
591 |
991 |
1313 |
30.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45242.1 |
1 |
153 |
377 |
19.09 |
153 |
47 |
4e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
561 |
714 |
1428 |
10.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5287 |
Augustus |
mRNA |
19474 |
20865 |
. |
- |
. |
ID=Dca45242.1;Parent=Dca45242 |
| scaffold5287 |
Augustus |
exon |
19474 |
20148 |
. |
- |
. |
ID=Dca45242.1.exon1;Parent=Dca45242.1 |
| scaffold5287 |
Augustus |
exon |
20407 |
20865 |
. |
- |
. |
ID=Dca45242.1.exon2;Parent=Dca45242.1 |
