Dca45245.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold5288)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45245.1 |
110 |
680 |
760 |
33.81 |
571 |
41 |
1e-106
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
155 |
756 |
1717 |
35.06 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45245.1 |
465 |
557 |
760 |
4.34 |
93 |
36 |
9e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5288 |
Augustus |
mRNA |
13006 |
16310 |
. |
+ |
. |
ID=Dca45245.1;Parent=Dca45245 |
| scaffold5288 |
Augustus |
exon |
13006 |
13143 |
. |
+ |
. |
ID=Dca45245.1.exon1;Parent=Dca45245.1 |
| scaffold5288 |
Augustus |
exon |
13683 |
13865 |
. |
+ |
. |
ID=Dca45245.1.exon2;Parent=Dca45245.1 |
| scaffold5288 |
Augustus |
exon |
14254 |
15645 |
. |
+ |
. |
ID=Dca45245.1.exon3;Parent=Dca45245.1 |
| scaffold5288 |
Augustus |
exon |
15741 |
16310 |
. |
+ |
. |
ID=Dca45245.1.exon4;Parent=Dca45245.1 |
