Carnation DB

Dca45257.1

Annotation

28-exons
f-1
sp|B9SLE2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0685890#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family protein | chr1:13089994-13097078 FORWARD LENGTH=1390
Repeat List (scaffold529)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45257.1	408	1623	1624	36.39	1216	43	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SLE2_RICCO	22	1351	1351	98.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45257.1	921	1623	1624	15.39	703	31	5e-55
Target_name	Start	End	Length	Cov(%)
AT1G35530.2	621	1389	1390	55.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold529	Augustus	mRNA	45249	59621	.	-	.	ID=Dca45257.1;Parent=Dca45257
scaffold529	Augustus	exon	45249	45822	.	-	.	ID=Dca45257.1.exon1;Parent=Dca45257.1
scaffold529	Augustus	exon	45956	46111	.	-	.	ID=Dca45257.1.exon2;Parent=Dca45257.1
scaffold529	Augustus	exon	46195	46243	.	-	.	ID=Dca45257.1.exon3;Parent=Dca45257.1
scaffold529	Augustus	exon	46365	46853	.	-	.	ID=Dca45257.1.exon4;Parent=Dca45257.1
scaffold529	Augustus	exon	46957	47415	.	-	.	ID=Dca45257.1.exon5;Parent=Dca45257.1
scaffold529	Augustus	exon	47585	47645	.	-	.	ID=Dca45257.1.exon6;Parent=Dca45257.1
scaffold529	Augustus	exon	47728	48054	.	-	.	ID=Dca45257.1.exon7;Parent=Dca45257.1
scaffold529	Augustus	exon	48648	48697	.	-	.	ID=Dca45257.1.exon8;Parent=Dca45257.1
scaffold529	Augustus	exon	49048	49118	.	-	.	ID=Dca45257.1.exon9;Parent=Dca45257.1
scaffold529	Augustus	exon	49209	49269	.	-	.	ID=Dca45257.1.exon10;Parent=Dca45257.1
scaffold529	Augustus	exon	49590	49720	.	-	.	ID=Dca45257.1.exon11;Parent=Dca45257.1
scaffold529	Augustus	exon	50126	50319	.	-	.	ID=Dca45257.1.exon12;Parent=Dca45257.1
scaffold529	Augustus	exon	50399	50512	.	-	.	ID=Dca45257.1.exon13;Parent=Dca45257.1
scaffold529	Augustus	exon	50860	50981	.	-	.	ID=Dca45257.1.exon14;Parent=Dca45257.1
scaffold529	Augustus	exon	51063	51117	.	-	.	ID=Dca45257.1.exon15;Parent=Dca45257.1
scaffold529	Augustus	exon	51204	51295	.	-	.	ID=Dca45257.1.exon16;Parent=Dca45257.1
scaffold529	Augustus	exon	51639	51753	.	-	.	ID=Dca45257.1.exon17;Parent=Dca45257.1
scaffold529	Augustus	exon	51849	51931	.	-	.	ID=Dca45257.1.exon18;Parent=Dca45257.1
scaffold529	Augustus	exon	52160	52303	.	-	.	ID=Dca45257.1.exon19;Parent=Dca45257.1
scaffold529	Augustus	exon	52781	53102	.	-	.	ID=Dca45257.1.exon20;Parent=Dca45257.1
scaffold529	Augustus	exon	54123	54217	.	-	.	ID=Dca45257.1.exon21;Parent=Dca45257.1
scaffold529	Augustus	exon	54308	54533	.	-	.	ID=Dca45257.1.exon22;Parent=Dca45257.1
scaffold529	Augustus	exon	54750	54836	.	-	.	ID=Dca45257.1.exon23;Parent=Dca45257.1
scaffold529	Augustus	exon	55526	55594	.	-	.	ID=Dca45257.1.exon24;Parent=Dca45257.1
scaffold529	Augustus	exon	56274	56436	.	-	.	ID=Dca45257.1.exon25;Parent=Dca45257.1
scaffold529	Augustus	exon	56540	56616	.	-	.	ID=Dca45257.1.exon26;Parent=Dca45257.1
scaffold529	Augustus	exon	57712	57840	.	-	.	ID=Dca45257.1.exon27;Parent=Dca45257.1
scaffold529	Augustus	exon	59262	59621	.	-	.	ID=Dca45257.1.exon28;Parent=Dca45257.1