Carnation DB

Dca45313.1

Annotation

27-exons
f-1
sp|F6GWJ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0029g01200#GO:0005737;GO:0005524;GO:0004825;GO:0000049;GO:0006431#3F1P1C
Os10t0400100-01 Methionyl-tRNA synthetase, class Ia domain containing protein.
Repeat List (scaffold53)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45313.1	1	55	70	42.85	55	55	2e-07
Target_name	Start	End	Length	Cov(%)
sp\|D7TTM6_VITVI	84	138	157	35.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45313.1	908	1047	1057	6.33	140	48	7e-30
Target_name	Start	End	Length	Cov(%)
AT4G13780.1	623	760	797	17.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold53	Augustus	mRNA	205535	216660	.	+	.	ID=Dca45313.1;Parent=Dca45313
scaffold53	Augustus	exon	205535	205646	.	+	.	ID=Dca45313.1.exon1;Parent=Dca45313.1
scaffold53	Augustus	exon	205981	206125	.	+	.	ID=Dca45313.1.exon2;Parent=Dca45313.1
scaffold53	Augustus	exon	206683	206836	.	+	.	ID=Dca45313.1.exon3;Parent=Dca45313.1
scaffold53	Augustus	exon	206928	207083	.	+	.	ID=Dca45313.1.exon4;Parent=Dca45313.1
scaffold53	Augustus	exon	207366	207596	.	+	.	ID=Dca45313.1.exon5;Parent=Dca45313.1
scaffold53	Augustus	exon	207727	207870	.	+	.	ID=Dca45313.1.exon6;Parent=Dca45313.1
scaffold53	Augustus	exon	208318	208408	.	+	.	ID=Dca45313.1.exon7;Parent=Dca45313.1
scaffold53	Augustus	exon	208572	208678	.	+	.	ID=Dca45313.1.exon8;Parent=Dca45313.1
scaffold53	Augustus	exon	208765	208879	.	+	.	ID=Dca45313.1.exon9;Parent=Dca45313.1
scaffold53	Augustus	exon	208967	209085	.	+	.	ID=Dca45313.1.exon10;Parent=Dca45313.1
scaffold53	Augustus	exon	209170	209235	.	+	.	ID=Dca45313.1.exon11;Parent=Dca45313.1
scaffold53	Augustus	exon	209357	209485	.	+	.	ID=Dca45313.1.exon12;Parent=Dca45313.1
scaffold53	Augustus	exon	209580	209720	.	+	.	ID=Dca45313.1.exon13;Parent=Dca45313.1
scaffold53	Augustus	exon	209946	210021	.	+	.	ID=Dca45313.1.exon14;Parent=Dca45313.1
scaffold53	Augustus	exon	210601	210761	.	+	.	ID=Dca45313.1.exon15;Parent=Dca45313.1
scaffold53	Augustus	exon	210857	210958	.	+	.	ID=Dca45313.1.exon16;Parent=Dca45313.1
scaffold53	Augustus	exon	211092	211287	.	+	.	ID=Dca45313.1.exon17;Parent=Dca45313.1
scaffold53	Augustus	exon	211500	211567	.	+	.	ID=Dca45313.1.exon18;Parent=Dca45313.1
scaffold53	Augustus	exon	212993	213094	.	+	.	ID=Dca45313.1.exon19;Parent=Dca45313.1
scaffold53	Augustus	exon	214000	214167	.	+	.	ID=Dca45313.1.exon20;Parent=Dca45313.1
scaffold53	Augustus	exon	214371	214436	.	+	.	ID=Dca45313.1.exon21;Parent=Dca45313.1
scaffold53	Augustus	exon	214819	214887	.	+	.	ID=Dca45313.1.exon22;Parent=Dca45313.1
scaffold53	Augustus	exon	215384	215496	.	+	.	ID=Dca45313.1.exon23;Parent=Dca45313.1
scaffold53	Augustus	exon	215750	215840	.	+	.	ID=Dca45313.1.exon24;Parent=Dca45313.1
scaffold53	Augustus	exon	215933	216001	.	+	.	ID=Dca45313.1.exon25;Parent=Dca45313.1
scaffold53	Augustus	exon	216095	216186	.	+	.	ID=Dca45313.1.exon26;Parent=Dca45313.1
scaffold53	Augustus	exon	216570	216660	.	+	.	ID=Dca45313.1.exon27;Parent=Dca45313.1