Dca4535.1
Annotation
- 4-exons
- f-1
- sp|A5AV98_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_015928#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold117)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4535.1 |
116 |
321 |
654 |
10.55 |
206 |
34 |
1e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AV98_VITVI |
20 |
221 |
764 |
26.43 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4535.1 |
350 |
528 |
654 |
11 |
179 |
34 |
2e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
549 |
765 |
1428 |
15.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold117 |
Augustus |
mRNA |
294856 |
299994 |
. |
- |
. |
ID=Dca4535.1;Parent=Dca4535 |
| scaffold117 |
Augustus |
exon |
294856 |
295663 |
. |
- |
. |
ID=Dca4535.1.exon1;Parent=Dca4535.1 |
| scaffold117 |
Augustus |
exon |
295802 |
295946 |
. |
- |
. |
ID=Dca4535.1.exon2;Parent=Dca4535.1 |
| scaffold117 |
Augustus |
exon |
296383 |
297081 |
. |
- |
. |
ID=Dca4535.1.exon3;Parent=Dca4535.1 |
| scaffold117 |
Augustus |
exon |
299682 |
299994 |
. |
- |
. |
ID=Dca4535.1.exon4;Parent=Dca4535.1 |
