Dca45374.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5309)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45374.1 |
59 |
520 |
1020 |
19.6 |
462 |
43 |
1e-92
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
9 |
456 |
1717 |
26.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45374.1 |
691 |
783 |
1020 |
3.43 |
93 |
38 |
3e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5309 |
Augustus |
mRNA |
41591 |
45274 |
. |
- |
. |
ID=Dca45374.1;Parent=Dca45374 |
| scaffold5309 |
Augustus |
exon |
41591 |
43001 |
. |
- |
. |
ID=Dca45374.1.exon1;Parent=Dca45374.1 |
| scaffold5309 |
Augustus |
exon |
43559 |
43644 |
. |
- |
. |
ID=Dca45374.1.exon2;Parent=Dca45374.1 |
| scaffold5309 |
Augustus |
exon |
43709 |
45274 |
. |
- |
. |
ID=Dca45374.1.exon3;Parent=Dca45374.1 |
