Carnation DB

Dca45392.1

Annotation

9-exons
f-1
sp|F6HF39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g02270#GO:0005524;GO:0004674#2F0P0C
AT3G13530.1 | Symbols: MAPKKK7, MAP3KE1 | mitogen-activated protein kinase kinase kinase 7 | chr3:4411934-4419320 REVERSE LENGTH=1368
Repeat List (scaffold5313)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45392.1	4	708	708	71.04	705	67	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HF39_VITVI	657	1405	1405	53.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45392.1	4	708	708	68.64	705	68	0
Target_name	Start	End	Length	Cov(%)
AT3G13530.1	661	1368	1368	51.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5313	Augus-PASA	mRNA	27272	34511	.	-	.	ID=Dca45392.1;Parent=Dca45392
scaffold5313	Augus-PASA	exon	27272	27454	.	-	.	ID=Dca45392.1.exon1;Parent=Dca45392.1
scaffold5313	Augus-PASA	exon	28488	28602	.	-	.	ID=Dca45392.1.exon2;Parent=Dca45392.1
scaffold5313	Augustus	exon	28830	29236	.	-	.	ID=Dca45392.1.exon3;Parent=Dca45392.1
scaffold5313	Augustus	exon	30015	30149	.	-	.	ID=Dca45392.1.exon4;Parent=Dca45392.1
scaffold5313	Augustus	exon	30354	30721	.	-	.	ID=Dca45392.1.exon5;Parent=Dca45392.1
scaffold5313	Augustus	exon	31983	32384	.	-	.	ID=Dca45392.1.exon6;Parent=Dca45392.1
scaffold5313	Augustus	exon	32465	32796	.	-	.	ID=Dca45392.1.exon7;Parent=Dca45392.1
scaffold5313	Augustus	exon	33289	33372	.	-	.	ID=Dca45392.1.exon8;Parent=Dca45392.1
scaffold5313	Augustus	exon	34411	34511	.	-	.	ID=Dca45392.1.exon9;Parent=Dca45392.1