Dca45458.1
Annotation
- 3-exons
- f-3
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5330)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45458.1 |
717 |
1264 |
1288 |
21.42 |
548 |
50 |
1e-159
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1025 |
1489 |
1501 |
30.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45458.1 |
235 |
727 |
1288 |
15.06 |
493 |
39 |
2e-101
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
552 |
707 |
70.43 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5330 |
Augustus |
mRNA |
1 |
4569 |
. |
+ |
. |
ID=Dca45458.1;Parent=Dca45458 |
| scaffold5330 |
Augustus |
exon |
1 |
2190 |
. |
+ |
. |
ID=Dca45458.1.exon1;Parent=Dca45458.1 |
| scaffold5330 |
Augustus |
exon |
2835 |
3913 |
. |
+ |
. |
ID=Dca45458.1.exon2;Parent=Dca45458.1 |
| scaffold5330 |
Augustus |
exon |
3970 |
4569 |
. |
+ |
. |
ID=Dca45458.1.exon3;Parent=Dca45458.1 |
