Dca45495.1
Annotation
- 4-exons
- f-1
- sp|Q40409_NICPL#Plasma membrane H+ ATPase#Nicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco)#Name=pma2#GO:0016021;GO:0005524;GO:0015662;GO:0006754;GO:0006812#2F2P1C
- Repeat List (scaffold534)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45495.1 |
83 |
145 |
146 |
30.13 |
63 |
64 |
2e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q40409_NICPL |
59 |
127 |
440 |
15.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45495.1 |
57 |
145 |
146 |
34.24 |
89 |
50 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0191200-02 |
398 |
497 |
812 |
12.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold534 |
Augustus |
mRNA |
45991 |
49472 |
. |
+ |
. |
ID=Dca45495.1;Parent=Dca45495 |
| scaffold534 |
Augustus |
exon |
45991 |
46062 |
. |
+ |
. |
ID=Dca45495.1.exon1;Parent=Dca45495.1 |
| scaffold534 |
Augustus |
exon |
46583 |
46705 |
. |
+ |
. |
ID=Dca45495.1.exon2;Parent=Dca45495.1 |
| scaffold534 |
Augustus |
exon |
48097 |
48178 |
. |
+ |
. |
ID=Dca45495.1.exon3;Parent=Dca45495.1 |
| scaffold534 |
Augustus |
exon |
49309 |
49472 |
. |
+ |
. |
ID=Dca45495.1.exon4;Parent=Dca45495.1 |
