Carnation DB

Dca45810.1

Annotation

3-exons
f-1
sp|B9HN59_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_876975#unknown#0F0P0C
Repeat List (scaffold540)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45810.1	25	110	110	35.45	86	46	4e-15
Target_name	Start	End	Length	Cov(%)
sp\|B9HN59_POPTR	236	320	324	26.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45810.1	23	110	110	33.63	88	43	6e-14
Target_name	Start	End	Length	Cov(%)
Os03t0725800-01	269	355	360	24.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold540	Augustus	mRNA	95851	98786	.	+	.	ID=Dca45810.1;Parent=Dca45810
scaffold540	Augustus	exon	95851	95895	.	+	.	ID=Dca45810.1.exon1;Parent=Dca45810.1
scaffold540	Augustus	exon	96668	96889	.	+	.	ID=Dca45810.1.exon2;Parent=Dca45810.1
scaffold540	Augustus	exon	98721	98786	.	+	.	ID=Dca45810.1.exon3;Parent=Dca45810.1
scaffold540	Augustus	mRNA	95851	98786	.	+	.	ID=Dca45810.2;Parent=Dca45810
scaffold540	Augustus	exon	95851	95895	.	+	.	ID=Dca45810.2.exon1;Parent=Dca45810.2
scaffold540	Augustus	exon	96668	96889	.	+	.	ID=Dca45810.2.exon2;Parent=Dca45810.2
scaffold540	Augustus	exon	98718	98786	.	+	.	ID=Dca45810.2.exon3;Parent=Dca45810.2