Dca46002.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold5446)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46002.1 |
2 |
593 |
669 |
43.19 |
592 |
44 |
4e-133
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
128 |
750 |
1717 |
36.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46002.1 |
384 |
478 |
669 |
4.93 |
95 |
33 |
5e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
67 |
168 |
192 |
53.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5446 |
Augustus |
mRNA |
6574 |
8780 |
. |
- |
. |
ID=Dca46002.1;Parent=Dca46002 |
| scaffold5446 |
Augustus |
exon |
6574 |
7160 |
. |
- |
. |
ID=Dca46002.1.exon1;Parent=Dca46002.1 |
| scaffold5446 |
Augustus |
exon |
7269 |
7580 |
. |
- |
. |
ID=Dca46002.1.exon2;Parent=Dca46002.1 |
| scaffold5446 |
Augustus |
exon |
7670 |
8780 |
. |
- |
. |
ID=Dca46002.1.exon3;Parent=Dca46002.1 |
