Carnation DB

Dca46090.1

Annotation

5-exons
f-1
sp|B9I1K6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_568704#GO:0047800#1F0P0C
Repeat List (scaffold547)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46090.1	1	240	243	72.42	240	73	2e-101
Target_name	Start	End	Length	Cov(%)
sp\|B9I1K6_POPTR	1	242	245	98.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46090.1	1	243	243	61.72	243	60	2e-82
Target_name	Start	End	Length	Cov(%)
Os04t0151900-01	16	264	265	93.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold547	Augustus	mRNA	10051	14432	.	+	.	ID=Dca46090.1;Parent=Dca46090
scaffold547	Augustus	exon	10051	10150	.	+	.	ID=Dca46090.1.exon1;Parent=Dca46090.1
scaffold547	Augus-PASA	exon	13038	13195	.	+	.	ID=Dca46090.1.exon2;Parent=Dca46090.1
scaffold547	Augus-PASA	exon	13310	13457	.	+	.	ID=Dca46090.1.exon3;Parent=Dca46090.1
scaffold547	Augus-PASA	exon	14009	14209	.	+	.	ID=Dca46090.1.exon4;Parent=Dca46090.1
scaffold547	Augus-PASA	exon	14308	14432	.	+	.	ID=Dca46090.1.exon5;Parent=Dca46090.1