Carnation DB

Dca46100.1

Annotation

5-exons
f-1
sp|B9HJQ7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1085278#GO:0003677#1F0P0C
Repeat List (scaffold547)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46100.1	76	132	168	17.26	57	51	6e-08
Target_name	Start	End	Length	Cov(%)
sp\|B9HJQ7_POPTR	186	239	256	21.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46100.1	75	128	168	15.47	54	49	3e-06
Target_name	Start	End	Length	Cov(%)
AT3G07565.4	211	261	268	19.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold547	Augustus	mRNA	65225	67938	.	+	.	ID=Dca46100.1;Parent=Dca46100
scaffold547	Augustus	exon	65225	65345	.	+	.	ID=Dca46100.1.exon1;Parent=Dca46100.1
scaffold547	Augustus	exon	67052	67155	.	+	.	ID=Dca46100.1.exon2;Parent=Dca46100.1
scaffold547	Augustus	exon	67254	67324	.	+	.	ID=Dca46100.1.exon3;Parent=Dca46100.1
scaffold547	Augustus	exon	67426	67511	.	+	.	ID=Dca46100.1.exon4;Parent=Dca46100.1
scaffold547	Augustus	exon	67814	67938	.	+	.	ID=Dca46100.1.exon5;Parent=Dca46100.1