Dca46116.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold5474)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46116.1 |
1 |
193 |
284 |
51.76 |
193 |
77 |
2e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
895 |
1077 |
1717 |
10.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46116.1 |
49 |
154 |
284 |
17.25 |
106 |
47 |
2e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
70 |
175 |
591 |
17.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5474 |
Augustus |
mRNA |
21249 |
25084 |
. |
+ |
. |
ID=Dca46116.1;Parent=Dca46116 |
| scaffold5474 |
Augustus |
exon |
21249 |
21737 |
. |
+ |
. |
ID=Dca46116.1.exon1;Parent=Dca46116.1 |
| scaffold5474 |
Augustus |
exon |
23971 |
24047 |
. |
+ |
. |
ID=Dca46116.1.exon2;Parent=Dca46116.1 |
| scaffold5474 |
Augustus |
exon |
24160 |
24320 |
. |
+ |
. |
ID=Dca46116.1.exon3;Parent=Dca46116.1 |
| scaffold5474 |
Augustus |
exon |
24957 |
25084 |
. |
+ |
. |
ID=Dca46116.1.exon4;Parent=Dca46116.1 |
