Dca46130.1
Annotation
- 3-exons
- f-1
- sp|A9PDV0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_728506#GO:0005524;GO:0017111#2F0P0C
- Repeat List (scaffold548)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46130.1 |
43 |
97 |
154 |
32.46 |
55 |
91 |
6e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PDV0_POPTR |
278 |
332 |
465 |
11.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46130.1 |
43 |
97 |
154 |
30.51 |
55 |
86 |
1e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G24710.1 |
289 |
343 |
475 |
11.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold548 |
Augustus |
mRNA |
15335 |
17085 |
. |
+ |
. |
ID=Dca46130.1;Parent=Dca46130 |
| scaffold548 |
Augustus |
exon |
15335 |
15402 |
. |
+ |
. |
ID=Dca46130.1.exon1;Parent=Dca46130.1 |
| scaffold548 |
Augustus |
exon |
16583 |
16715 |
. |
+ |
. |
ID=Dca46130.1.exon2;Parent=Dca46130.1 |
| scaffold548 |
Augustus |
exon |
16823 |
17085 |
. |
+ |
. |
ID=Dca46130.1.exon3;Parent=Dca46130.1 |
