Carnation DB

Dca46142.1

Annotation

7-exons
f-1
sp|F6HP70_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0100g00370#GO:0005524;GO:0003676;GO:0004832;GO:0015074;GO:0006438#3F2P0C
AT1G14610.1 | Symbols: TWN2, VALRS | valyl-tRNA synthetase / valine--tRNA ligase (VALRS) | chr1:5008502-5014486 REVERSE LENGTH=1108
Repeat List (scaffold5481)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46142.1	1	165	175	82.28	165	77	4e-80
Target_name	Start	End	Length	Cov(%)
sp\|F6HP70_VITVI	91	278	1318	14.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46142.1	1	165	175	77.71	165	73	2e-78
Target_name	Start	End	Length	Cov(%)
AT1G14610.1	136	323	1108	16.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5481	Augustus	mRNA	17098	19454	.	-	.	ID=Dca46142.1;Parent=Dca46142
scaffold5481	Augustus	exon	17098	17191	.	-	.	ID=Dca46142.1.exon1;Parent=Dca46142.1
scaffold5481	Augustus	exon	18174	18253	.	-	.	ID=Dca46142.1.exon2;Parent=Dca46142.1
scaffold5481	Augustus	exon	18359	18442	.	-	.	ID=Dca46142.1.exon3;Parent=Dca46142.1
scaffold5481	Augustus	exon	18543	18620	.	-	.	ID=Dca46142.1.exon4;Parent=Dca46142.1
scaffold5481	Augustus	exon	18850	18933	.	-	.	ID=Dca46142.1.exon5;Parent=Dca46142.1
scaffold5481	Augustus	exon	19039	19104	.	-	.	ID=Dca46142.1.exon6;Parent=Dca46142.1
scaffold5481	Augustus	exon	19413	19454	.	-	.	ID=Dca46142.1.exon7;Parent=Dca46142.1