Carnation DB

Dca46160.1

Annotation

7-exons
f-1
sp|D7U1V9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0102g01170#GO:0005783;GO:0003854;GO:0000166;GO:0006694#2F1P1C
AT2G43420.1 | Symbols: | 3-beta hydroxysteroid dehydrogenase/isomerase family protein | chr2:18031493-18034936 REVERSE LENGTH=561
Repeat List (scaffold5488)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46160.1	22	301	370	42.97	280	56	4e-90
Target_name	Start	End	Length	Cov(%)
sp\|D7U1V9_VITVI	9	297	581	49.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46160.1	13	287	370	40.27	275	54	4e-82
Target_name	Start	End	Length	Cov(%)
AT2G43420.1	5	280	561	49.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5488	Augustus	mRNA	7924	12167	.	+	.	ID=Dca46160.1;Parent=Dca46160
scaffold5488	Augustus	exon	7924	8191	.	+	.	ID=Dca46160.1.exon1;Parent=Dca46160.1
scaffold5488	Augustus	exon	8996	9085	.	+	.	ID=Dca46160.1.exon2;Parent=Dca46160.1
scaffold5488	Augustus	exon	9169	9302	.	+	.	ID=Dca46160.1.exon3;Parent=Dca46160.1
scaffold5488	Augustus	exon	9395	9565	.	+	.	ID=Dca46160.1.exon4;Parent=Dca46160.1
scaffold5488	Augustus	exon	11080	11196	.	+	.	ID=Dca46160.1.exon5;Parent=Dca46160.1
scaffold5488	Augustus	exon	11375	11454	.	+	.	ID=Dca46160.1.exon6;Parent=Dca46160.1
scaffold5488	Augustus	exon	11915	12167	.	+	.	ID=Dca46160.1.exon7;Parent=Dca46160.1