Carnation DB

Dca46161.1

Annotation

6-exons
f-1
sp|D7U1V9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0102g01170#GO:0005783;GO:0003854;GO:0000166;GO:0006694#2F1P1C
sp|B9SU06_RICCO#Hydroxysteroid dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0454370#GO:0005783;GO:0003854;GO:0000166;GO:0047012;GO:0006694#3F1P1C
Repeat List (scaffold5488)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46161.1	1	282	286	46.15	282	47	1e-64
Target_name	Start	End	Length	Cov(%)
sp\|D7U1V9_VITVI	290	572	581	48.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46161.1	1	243	286	38.81	243	44	2e-47
Target_name	Start	End	Length	Cov(%)
AT2G43420.1	293	530	561	42.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5488	Augustus	mRNA	12411	16154	.	+	.	ID=Dca46161.1;Parent=Dca46161
scaffold5488	Augustus	exon	12411	12578	.	+	.	ID=Dca46161.1.exon1;Parent=Dca46161.1
scaffold5488	Augustus	exon	13162	13279	.	+	.	ID=Dca46161.1.exon2;Parent=Dca46161.1
scaffold5488	Augustus	exon	14019	14193	.	+	.	ID=Dca46161.1.exon3;Parent=Dca46161.1
scaffold5488	Augustus	exon	14946	15090	.	+	.	ID=Dca46161.1.exon4;Parent=Dca46161.1
scaffold5488	Augustus	exon	15804	15870	.	+	.	ID=Dca46161.1.exon5;Parent=Dca46161.1
scaffold5488	Augustus	exon	15967	16154	.	+	.	ID=Dca46161.1.exon6;Parent=Dca46161.1