Carnation DB

Dca46171.1

Annotation

6-exons
f-1
sp|B9T5K0_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0020930#unknown#0F0P0C
Repeat List (scaffold549)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46171.1	5	569	570	55.08	565	53	5e-158
Target_name	Start	End	Length	Cov(%)
sp\|B9T5K0_RICCO	5	571	573	98.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46171.1	5	570	570	53.33	566	50	1e-132
Target_name	Start	End	Length	Cov(%)
AT5G65540.1	5	605	605	99.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold549	Augustus	mRNA	41607	44199	.	-	.	ID=Dca46171.1;Parent=Dca46171
scaffold549	Augustus	exon	41607	41727	.	-	.	ID=Dca46171.1.exon1;Parent=Dca46171.1
scaffold549	Augustus	exon	41811	42139	.	-	.	ID=Dca46171.1.exon2;Parent=Dca46171.1
scaffold549	Augustus	exon	42526	42652	.	-	.	ID=Dca46171.1.exon3;Parent=Dca46171.1
scaffold549	Augustus	exon	42846	43609	.	-	.	ID=Dca46171.1.exon4;Parent=Dca46171.1
scaffold549	Augus-PASA	exon	43724	43794	.	-	.	ID=Dca46171.1.exon5;Parent=Dca46171.1
scaffold549	Augus-PASA	exon	43899	44199	.	-	.	ID=Dca46171.1.exon6;Parent=Dca46171.1