Carnation DB

Dca46172.1

Annotation

5-exons
f-1
sp|F6HWV5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0768g00040#GO:0005524;GO:0004672#2F0P0C
AT5G10520.1 | Symbols: RBK1 | ROP binding protein kinases 1 | chr5:3320584-3322649 REVERSE LENGTH=467
Repeat List (scaffold549)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46172.1	38	266	400	29.25	229	50	2e-52
Target_name	Start	End	Length	Cov(%)
sp\|F6HWV5_VITVI	17	246	246	93.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46172.1	267	400	400	16.75	134	50	3e-32
Target_name	Start	End	Length	Cov(%)
AT5G10520.1	337	467	467	28.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold549	Augustus	mRNA	47970	50211	.	+	.	ID=Dca46172.1;Parent=Dca46172
scaffold549	Augustus	exon	47970	48507	.	+	.	ID=Dca46172.1.exon1;Parent=Dca46172.1
scaffold549	Augustus	exon	48769	49029	.	+	.	ID=Dca46172.1.exon2;Parent=Dca46172.1
scaffold549	Augustus	exon	49623	49714	.	+	.	ID=Dca46172.1.exon3;Parent=Dca46172.1
scaffold549	Augustus	exon	49805	49954	.	+	.	ID=Dca46172.1.exon4;Parent=Dca46172.1
scaffold549	Augustus	exon	50050	50211	.	+	.	ID=Dca46172.1.exon5;Parent=Dca46172.1