Carnation DB

Dca46174.1

Annotation

18-exons
f-1
sp|A5C5D0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_036820#GO:0005643;GO:0016973#0F1P1C
sp|B9RMT7_RICCO#Nucleoporin GLE1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1083720#GO:0005643;GO:0016973#0F1P1C
Repeat List (scaffold549)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46174.1	34	636	690	44.2	603	47	5e-145
Target_name	Start	End	Length	Cov(%)
sp\|A5C5D0_VITVI	68	716	745	87.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46174.1	36	657	690	35.65	622	38	3e-106
Target_name	Start	End	Length	Cov(%)
AT1G13120.1	1	608	611	99.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold549	Augustus	mRNA	57055	67955	.	+	.	ID=Dca46174.1;Parent=Dca46174
scaffold549	Augustus	exon	57055	57063	.	+	.	ID=Dca46174.1.exon1;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	58418	58455	.	+	.	ID=Dca46174.1.exon2;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	59251	59310	.	+	.	ID=Dca46174.1.exon3;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	59399	59539	.	+	.	ID=Dca46174.1.exon4;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	59663	59809	.	+	.	ID=Dca46174.1.exon5;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	61747	61867	.	+	.	ID=Dca46174.1.exon6;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	62377	62525	.	+	.	ID=Dca46174.1.exon7;Parent=Dca46174.1
scaffold549	Augustus	exon	62798	62969	.	+	.	ID=Dca46174.1.exon8;Parent=Dca46174.1
scaffold549	Augustus	exon	63349	63526	.	+	.	ID=Dca46174.1.exon9;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	64029	64138	.	+	.	ID=Dca46174.1.exon10;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	64556	64626	.	+	.	ID=Dca46174.1.exon11;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	64996	65077	.	+	.	ID=Dca46174.1.exon12;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	65743	65829	.	+	.	ID=Dca46174.1.exon13;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	66025	66108	.	+	.	ID=Dca46174.1.exon14;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	66226	66357	.	+	.	ID=Dca46174.1.exon15;Parent=Dca46174.1
scaffold549	Augus-PASA	exon	66490	66612	.	+	.	ID=Dca46174.1.exon16;Parent=Dca46174.1
scaffold549	Augustus	exon	66946	67244	.	+	.	ID=Dca46174.1.exon17;Parent=Dca46174.1
scaffold549	Augustus	exon	67886	67955	.	+	.	ID=Dca46174.1.exon18;Parent=Dca46174.1