Carnation DB

Dca46184.1

Annotation

8-exons
f-1
sp|B9HFS0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_655493#GO:0016020;GO:0015297;GO:0015238#2F0P1C
AT5G65380.1 | Symbols: | MATE efflux family protein | chr5:26123241-26126352 REVERSE LENGTH=486
Repeat List (scaffold549)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46184.1	31	499	499	71.54	469	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HFS0_POPTR	20	488	488	96.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46184.1	17	499	499	66.13	483	69	0
Target_name	Start	End	Length	Cov(%)
AT5G65380.1	7	485	486	98.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold549	Augus-PASA	mRNA	123793	126068	.	+	.	ID=Dca46184.1;Parent=Dca46184
scaffold549	Augus-PASA	exon	123793	124110	.	+	.	ID=Dca46184.1.exon1;Parent=Dca46184.1
scaffold549	Augus-PASA	exon	124236	124777	.	+	.	ID=Dca46184.1.exon2;Parent=Dca46184.1
scaffold549	Augus-PASA	exon	124879	124965	.	+	.	ID=Dca46184.1.exon3;Parent=Dca46184.1
scaffold549	Augus-PASA	exon	125132	125188	.	+	.	ID=Dca46184.1.exon4;Parent=Dca46184.1
scaffold549	Augustus	exon	125271	125509	.	+	.	ID=Dca46184.1.exon5;Parent=Dca46184.1
scaffold549	Augustus	exon	125590	125708	.	+	.	ID=Dca46184.1.exon6;Parent=Dca46184.1
scaffold549	Augustus	exon	125821	125910	.	+	.	ID=Dca46184.1.exon7;Parent=Dca46184.1
scaffold549	Augustus	exon	126021	126068	.	+	.	ID=Dca46184.1.exon8;Parent=Dca46184.1