Carnation DB

Dca46195.1

Annotation

6-exons
f-1
sp|A5AHP9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040546#GO:0003676;GO:0015074#1F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold5492)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46195.1	271	899	982	30.75	629	46	3e-153
Target_name	Start	End	Length	Cov(%)
sp\|A5AHP9_VITVI	133	770	1129	56.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46195.1	269	497	982	7.53	229	30	3e-13
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	377	581	1401	14.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5492	Augustus	mRNA	16888	21260	.	+	.	ID=Dca46195.1;Parent=Dca46195
scaffold5492	Augustus	exon	16888	17163	.	+	.	ID=Dca46195.1.exon1;Parent=Dca46195.1
scaffold5492	Augustus	exon	17463	17781	.	+	.	ID=Dca46195.1.exon2;Parent=Dca46195.1
scaffold5492	Augustus	exon	17865	18757	.	+	.	ID=Dca46195.1.exon3;Parent=Dca46195.1
scaffold5492	Augustus	exon	18976	20155	.	+	.	ID=Dca46195.1.exon4;Parent=Dca46195.1
scaffold5492	Augustus	exon	20310	20527	.	+	.	ID=Dca46195.1.exon5;Parent=Dca46195.1
scaffold5492	Augustus	exon	21198	21260	.	+	.	ID=Dca46195.1.exon6;Parent=Dca46195.1